Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm22323-201ENSMUST00000103832 109 ntBASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm13297-201ENSMUST00000120205 934 ntBASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Rprl1-201ENSMUST00000158050 327 ntBASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm24255-201ENSMUST00000104481 128 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm25214-201ENSMUST00000104573 129 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm15370-201ENSMUST00000117158 253 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm4986-201ENSMUST00000119731 549 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm12997-201ENSMUST00000120207 640 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm17376-201ENSMUST00000166016 84 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm6082-201ENSMUST00000215204 454 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vcpip1Q8CDG3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vcpip1Q8CDG3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.83□□□□□ -0.35
Vcpip1Q8CDG3 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vcpip1Q8CDG3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vcpip1Q8CDG3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vcpip1Q8CDG3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vcpip1Q8CDG3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vcpip1Q8CDG3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.83□□□□□ -0.35
Vcpip1Q8CDG3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.83□□□□□ -0.35
Vcpip1Q8CDG3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms