Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm15003-201ENSMUST00000118884 446 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm11244-201ENSMUST00000121243 237 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm4604-201ENSMUST00000025040 390 ntBASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.78□□□□□ -0.68
Col6a6Q8C6K9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Col6a6Q8C6K9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Gm25076-201ENSMUST00000104098 132 ntBASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Gm9136-201ENSMUST00000193368 454 ntBASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Gm43778-201ENSMUST00000199438 199 ntBASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Gm6450-201ENSMUST00000200896 574 ntBASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Col6a6Q8C6K9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Gm25766-201ENSMUST00000104101 131 ntBASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Col6a6Q8C6K9 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms