Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Gm9797-202ENSMUST00000218003 294 ntBASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Gm26448-201ENSMUST00000082446 203 ntBASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc60Q8C4J0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Mir7677-201ENSMUST00000184226 67 ntBASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Gm28450-201ENSMUST00000187349 638 ntBASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Gm18730-201ENSMUST00000218038 343 ntBASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc60Q8C4J0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC15.21■□□□□ 0.02
Ccdc60Q8C4J0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Ccdc60Q8C4J0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ccdc60Q8C4J0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Ccdc60Q8C4J0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc60Q8C4J0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc60Q8C4J0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc60Q8C4J0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Gm23596-201ENSMUST00000104304 132 ntBASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Gm11660-201ENSMUST00000120955 412 ntBASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Gm9192-201ENSMUST00000183221 985 ntBASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc60Q8C4J0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm44806-201ENSMUST00000205574 2303 ntBASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm23200-201ENSMUST00000104379 132 ntBASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm807-202ENSMUST00000224929 408 ntBASIC15.19■□□□□ 0.02
Ccdc60Q8C4J0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms