Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm15004-201ENSMUST00000119192 630 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm25890-201ENSMUST00000177643 165 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm22614-201ENSMUST00000178300 165 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm6114-201ENSMUST00000182472 968 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm19287-201ENSMUST00000203190 358 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm22042-201ENSMUST00000082989 165 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm26110-201ENSMUST00000083971 165 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.31□□□□□ -0.44
Trub1Q8C0D0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gm25668-201ENSMUST00000157700 129 ntBASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gm6082-201ENSMUST00000215204 454 ntBASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trub1Q8C0D0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trub1Q8C0D0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms