Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trerf1Q8BXJ2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Gm14999-201ENSMUST00000121039 624 ntBASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Gm27243-201ENSMUST00000183964 521 ntBASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Gm10076-201ENSMUST00000073238 384 ntBASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trerf1Q8BXJ2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Gm25214-201ENSMUST00000104573 129 ntBASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Gm12314-201ENSMUST00000118104 538 ntBASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Gm25043-201ENSMUST00000158604 212 ntBASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Gm26956-201ENSMUST00000182176 986 ntBASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Gm30285-201ENSMUST00000214614 422 ntBASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trerf1Q8BXJ2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trerf1Q8BXJ2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms