Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gm35960-201ENSMUST00000202712 767 ntBASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Gm5369-201ENSMUST00000217499 588 ntBASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nup54Q8BTS4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Gm14058-201ENSMUST00000116082 735 ntBASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Gm23085-201ENSMUST00000157849 293 ntBASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Gm10288-201ENSMUST00000084614 537 ntBASIC12.21□□□□□ -0.45
Nup54Q8BTS4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nup54Q8BTS4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup54Q8BTS4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup54Q8BTS4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup54Q8BTS4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nup54Q8BTS4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nup54Q8BTS4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nup54Q8BTS4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Nup54Q8BTS4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nup54Q8BTS4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Gm38117-201ENSMUST00000194653 939 ntBASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Gm6450-201ENSMUST00000200896 574 ntBASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nup54Q8BTS4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms