Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col16a1Q8BLX7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Col16a1Q8BLX7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col16a1Q8BLX7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col16a1Q8BLX7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Col16a1Q8BLX7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
Col16a1Q8BLX7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm43773-201ENSMUST00000198548 2162 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm23612-201ENSMUST00000103823 110 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm22594-201ENSMUST00000104251 130 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm16219-201ENSMUST00000120096 274 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm25677-201ENSMUST00000174983 72 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm23576-201ENSMUST00000179918 110 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm5599-201ENSMUST00000209602 788 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm26670-202ENSMUST00000226862 340 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 AC154589.2-201ENSMUST00000228847 251 ntBASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col16a1Q8BLX7 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Gm18210-201ENSMUST00000209001 1524 ntBASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Gm7841-201ENSMUST00000122108 1629 ntBASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Gm24992-201ENSMUST00000157412 130 ntBASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 BC106175-202ENSMUST00000219344 1213 ntBASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Gm18986-201ENSMUST00000216029 1986 ntBASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col16a1Q8BLX7 Gm43760-201ENSMUST00000202120 3015 ntBASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Gm25562-201ENSMUST00000104608 133 ntBASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Gm14993-201ENSMUST00000121180 164 ntBASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Gm15329-201ENSMUST00000121408 155 ntBASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Gm13981-201ENSMUST00000122360 447 ntBASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Gm16167-201ENSMUST00000160428 1065 ntBASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC15.37■□□□□ 0.05
Col16a1Q8BLX7 Gm29067-201ENSMUST00000190821 470 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms