Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm4986-201ENSMUST00000119731 549 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm24845-201ENSMUST00000158034 109 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm17420-201ENSMUST00000164753 153 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm38002-201ENSMUST00000193255 180 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm45880-201ENSMUST00000213041 853 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf38Q8BI21 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm23912-201ENSMUST00000104687 87 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm13392-201ENSMUST00000117708 150 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm25043-201ENSMUST00000158604 212 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm5706-201ENSMUST00000181525 993 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm28882-201ENSMUST00000185504 314 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm10478-201ENSMUST00000084451 396 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Rnf38Q8BI21 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms