Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Gm12490-201ENSMUST00000120255 560 ntBASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Gm16177-201ENSMUST00000120728 718 ntBASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Gm43818-201ENSMUST00000200605 466 ntBASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim6Q8BGE7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Gm13736-201ENSMUST00000119272 253 ntBASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Gm13342-201ENSMUST00000121055 207 ntBASIC12.69□□□□□ -0.38
Trim6Q8BGE7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim6Q8BGE7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Gm27023-201ENSMUST00000182372 285 ntBASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Gm39404-201ENSMUST00000216350 313 ntBASIC12.68□□□□□ -0.38
Trim6Q8BGE7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim6Q8BGE7 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms