Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vrk1Q80X41 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.44□□□□□ -0.58
Vrk1Q80X41 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.44□□□□□ -0.58
Vrk1Q80X41 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gm45219-201ENSMUST00000205602 465 ntBASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gm45398-201ENSMUST00000210561 165 ntBASIC11.44□□□□□ -0.58
Vrk1Q80X41 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.44□□□□□ -0.58
Vrk1Q80X41 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.44□□□□□ -0.58
Vrk1Q80X41 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.44□□□□□ -0.58
Vrk1Q80X41 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vrk1Q80X41 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.44□□□□□ -0.58
Vrk1Q80X41 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.43□□□□□ -0.58
Vrk1Q80X41 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.43□□□□□ -0.58
Vrk1Q80X41 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm44882-201ENSMUST00000205702 802 ntBASIC11.43□□□□□ -0.58
Vrk1Q80X41 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.43□□□□□ -0.58
Vrk1Q80X41 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.43□□□□□ -0.58
Vrk1Q80X41 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.43□□□□□ -0.58
Vrk1Q80X41 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Vrk1Q80X41 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 221.3 ms