Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm22885-201ENSMUST00000157410 107 ntBASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Mir6546-201ENSMUST00000184460 62 ntBASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm21811-201ENSMUST00000096485 930 ntBASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf38bQ80SY5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Gm13736-201ENSMUST00000119272 253 ntBASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Gm12516-201ENSMUST00000120819 385 ntBASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Gm5616-201ENSMUST00000165252 384 ntBASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Gm8741-201ENSMUST00000174736 384 ntBASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf38bQ80SY5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms