Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Gm43118-201ENSMUST00000199149 775 ntBASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Gm22058-201ENSMUST00000083393 310 ntBASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ctdp1Q7TSG2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctdp1Q7TSG2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ctdp1Q7TSG2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.02□□□□□ -0.32
Ctdp1Q7TSG2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ctdp1Q7TSG2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctdp1Q7TSG2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ctdp1Q7TSG2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Gm24548-201ENSMUST00000158650 108 ntBASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Gm9257-201ENSMUST00000221254 232 ntBASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctdp1Q7TSG2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Gm7809-201ENSMUST00000153199 742 ntBASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Gm43179-201ENSMUST00000198797 275 ntBASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctdp1Q7TSG2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms