Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Vma21Q78T54 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Vma21Q78T54 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
Vma21Q78T54 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Vma21Q78T54 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.71□□□□□ -0.85
Vma21Q78T54 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Vma21Q78T54 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.71□□□□□ -0.85
Vma21Q78T54 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.71□□□□□ -0.85
Vma21Q78T54 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Vma21Q78T54 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Vma21Q78T54 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Vma21Q78T54 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Vma21Q78T54 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.71□□□□□ -0.85
Vma21Q78T54 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Vma21Q78T54 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.71□□□□□ -0.85
Vma21Q78T54 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Vma21Q78T54 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Vma21Q78T54 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Vma21Q78T54 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Vma21Q78T54 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.71□□□□□ -0.85
Vma21Q78T54 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Vma21Q78T54 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.71□□□□□ -0.86
Vma21Q78T54 Gm15610-201ENSMUST00000120584 195 ntBASIC9.71□□□□□ -0.86
Vma21Q78T54 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.71□□□□□ -0.86
Vma21Q78T54 Gm17150-201ENSMUST00000165577 381 ntBASIC9.71□□□□□ -0.86
Vma21Q78T54 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
Vma21Q78T54 Gm5706-201ENSMUST00000181525 993 ntBASIC9.71□□□□□ -0.86
Vma21Q78T54 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.71□□□□□ -0.86
Vma21Q78T54 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.71□□□□□ -0.86
Vma21Q78T54 Gm6266-201ENSMUST00000203844 806 ntBASIC9.71□□□□□ -0.86
Vma21Q78T54 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.71□□□□□ -0.86
Vma21Q78T54 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Vma21Q78T54 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.71□□□□□ -0.86
Vma21Q78T54 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Vma21Q78T54 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.71□□□□□ -0.86
Vma21Q78T54 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Vma21Q78T54 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Vma21Q78T54 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.7□□□□□ -0.86
Vma21Q78T54 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.7□□□□□ -0.86
Vma21Q78T54 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms