Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssx9Q6XAS3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssx9Q6XAS3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssx9Q6XAS3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssx9Q6XAS3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssx9Q6XAS3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssx9Q6XAS3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssx9Q6XAS3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gm14726-201ENSMUST00000120623 896 ntBASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gm9368-201ENSMUST00000219348 831 ntBASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssx9Q6XAS3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm11930-201ENSMUST00000117788 190 ntBASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm5070-201ENSMUST00000177599 862 ntBASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Gm7399-201ENSMUST00000032395 858 ntBASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssx9Q6XAS3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ssx9Q6XAS3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms