Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Gm38241-201ENSMUST00000192641 898 ntBASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Scaf4Q6PFF0 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Gm28882-201ENSMUST00000185504 314 ntBASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms