Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm45113-201ENSMUST00000207518 165 ntBASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm17931-201ENSMUST00000208132 634 ntBASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Olfr584-201ENSMUST00000098210 964 ntBASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Cog3-203ENSMUST00000227473 4197 ntBASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm20392-201ENSMUST00000173047 701 ntBASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm6450-201ENSMUST00000200896 574 ntBASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm5805-201ENSMUST00000072779 456 ntBASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Snrnp40Q6PE01 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Gm12030-201ENSMUST00000121917 223 ntBASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Gm9089-201ENSMUST00000122027 526 ntBASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Gm9135-201ENSMUST00000182963 990 ntBASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Gm9136-201ENSMUST00000193368 454 ntBASIC10.49□□□□□ -0.73
Snrnp40Q6PE01 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms