Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm14740-201ENSMUST00000118538 1150 ntBASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Olfml3-204ENSMUST00000169286 874 ntBASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm5342-201ENSMUST00000181982 1003 ntBASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm26982-201ENSMUST00000182250 1151 ntBASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm44552-201ENSMUST00000205458 1247 ntBASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm5599-201ENSMUST00000209602 788 ntBASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 AC158392.3-201ENSMUST00000224271 1284 ntBASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm5468-202ENSMUST00000227851 682 ntBASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd4Q6PDQ2 Gm44573-201ENSMUST00000191753 2370 ntBASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 AC134248.1-201ENSMUST00000216113 1176 ntBASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Gm12218-201ENSMUST00000117666 399 ntBASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC15.31■□□□□ 0.04
Chd4Q6PDQ2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chd4Q6PDQ2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Gm12389-201ENSMUST00000117696 418 ntBASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Gm18201-201ENSMUST00000174735 875 ntBASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Gm37638-201ENSMUST00000194337 1123 ntBASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 AC122891.1-201ENSMUST00000218671 268 ntBASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd4Q6PDQ2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms