Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Gm9396-201ENSMUST00000076703 567 ntBASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smarcd3Q6P9Z1 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd3Q6P9Z1 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd3Q6P9Z1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd3Q6P9Z1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd3Q6P9Z1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
Smarcd3Q6P9Z1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd3Q6P9Z1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd3Q6P9Z1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd3Q6P9Z1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smarcd3Q6P9Z1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm10434-201ENSMUST00000101158 471 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Mir1247-201ENSMUST00000116706 82 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm14660-201ENSMUST00000119809 575 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm13875-201ENSMUST00000120162 282 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Mir7085-201ENSMUST00000184353 66 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 AY702102-202ENSMUST00000194651 1173 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm18711-201ENSMUST00000199341 750 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smarcd3Q6P9Z1 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm13316-201ENSMUST00000140537 691 ntBASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Snora78-201ENSMUST00000158630 128 ntBASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm28882-201ENSMUST00000185504 314 ntBASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms