Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm14109-201ENSMUST00000118814 309 ntBASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm19187-201ENSMUST00000206781 892 ntBASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sp140Q6NSQ5 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Gm14441-201ENSMUST00000121960 540 ntBASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sp140Q6NSQ5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Gm38266-201ENSMUST00000194931 421 ntBASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Gm43758-201ENSMUST00000199500 367 ntBASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Gm45598-202ENSMUST00000210719 986 ntBASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sp140Q6NSQ5 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms