Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
VcanQ62059 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
VcanQ62059 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
VcanQ62059 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VcanQ62059 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
VcanQ62059 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.88□□□□□ -0.67
VcanQ62059 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm14165-201ENSMUST00000121456 952 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Gm23647-201ENSMUST00000175042 109 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Mir3091-201ENSMUST00000175086 76 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Rn5s-201ENSMUST00000177555 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s108-201ENSMUST00000177575 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s121-201ENSMUST00000177589 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s146-201ENSMUST00000177889 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm22109-201ENSMUST00000177995 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm22291-201ENSMUST00000178027 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s141-201ENSMUST00000178066 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm23284-201ENSMUST00000178069 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s100-201ENSMUST00000178106 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s111-201ENSMUST00000178203 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s105-201ENSMUST00000178499 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s149-201ENSMUST00000178520 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s103-201ENSMUST00000178755 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s123-201ENSMUST00000178804 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm25018-201ENSMUST00000179081 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm25212-201ENSMUST00000179432 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm26391-201ENSMUST00000179843 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm38117-201ENSMUST00000194653 939 ntBASIC10.88□□□□□ -0.67
VcanQ62059 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
VcanQ62059 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm24089-201ENSMUST00000093696 109 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
VcanQ62059 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
VcanQ62059 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VcanQ62059 Gm9523-201ENSMUST00000199146 1159 ntBASIC10.88□□□□□ -0.67
VcanQ62059 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC10.88□□□□□ -0.67
VcanQ62059 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VcanQ62059 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.88□□□□□ -0.67
VcanQ62059 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
VcanQ62059 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Gm16547-201ENSMUST00000159474 293 ntBASIC10.87□□□□□ -0.67
VcanQ62059 Gm9372-201ENSMUST00000168454 430 ntBASIC10.87□□□□□ -0.67
VcanQ62059 Gm18711-201ENSMUST00000199341 750 ntBASIC10.87□□□□□ -0.67
VcanQ62059 Gm6518-201ENSMUST00000208450 342 ntBASIC10.87□□□□□ -0.67
VcanQ62059 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
VcanQ62059 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
VcanQ62059 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
VcanQ62059 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
VcanQ62059 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VcanQ62059 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.87□□□□□ -0.67
VcanQ62059 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms