Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Matn2-203ENSMUST00000226766 3252 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ctr9Q62018 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm7851-201ENSMUST00000117574 323 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm11331-201ENSMUST00000119764 288 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm8566-201ENSMUST00000120174 465 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.11□□□□□ -0.15
Ctr9Q62018 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctr9Q62018 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm27390-201ENSMUST00000184516 176 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC14.11□□□□□ -0.15
Ctr9Q62018 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctr9Q62018 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ctr9Q62018 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ctr9Q62018 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.11□□□□□ -0.15
Ctr9Q62018 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.11□□□□□ -0.15
Ctr9Q62018 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ctr9Q62018 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctr9Q62018 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctr9Q62018 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.1□□□□□ -0.15
Ctr9Q62018 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm14724-201ENSMUST00000118400 537 ntBASIC14.1□□□□□ -0.15
Ctr9Q62018 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.1□□□□□ -0.15
Ctr9Q62018 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctr9Q62018 Spcs1-203ENSMUST00000226374 592 ntBASIC14.1□□□□□ -0.15
Ctr9Q62018 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ctr9Q62018 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ctr9Q62018 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctr9Q62018 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm23251-201ENSMUST00000103773 110 ntBASIC14.09□□□□□ -0.15
Ctr9Q62018 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm11660-201ENSMUST00000120955 412 ntBASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms