Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm7405-201ENSMUST00000121476 1337 ntBASIC15.69■□□□□ 0.1
Gli3Q61602 Gm14829-201ENSMUST00000121499 1138 ntBASIC15.69■□□□□ 0.1
Gli3Q61602 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.69■□□□□ 0.1
Gli3Q61602 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gli3Q61602 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Gli3Q61602 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Gli3Q61602 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Gli3Q61602 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli3Q61602 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Gli3Q61602 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC15.68■□□□□ 0.1
Gli3Q61602 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Gm15617-201ENSMUST00000118973 771 ntBASIC15.68■□□□□ 0.1
Gli3Q61602 Gm8302-201ENSMUST00000119217 852 ntBASIC15.68■□□□□ 0.1
Gli3Q61602 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC15.68■□□□□ 0.1
Gli3Q61602 Gm6352-201ENSMUST00000203583 1134 ntBASIC15.68■□□□□ 0.1
Gli3Q61602 CT030195.2-201ENSMUST00000226074 1286 ntBASIC15.68■□□□□ 0.1
Gli3Q61602 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Gli3Q61602 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Gli3Q61602 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gli3Q61602 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Gli3Q61602 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.68■□□□□ 0.1
Gli3Q61602 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.68■□□□□ 0.1
Gli3Q61602 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli3Q61602 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC15.68■□□□□ 0.1
Gli3Q61602 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Gli3Q61602 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Gli3Q61602 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Gli3Q61602 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Gli3Q61602 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC15.67■□□□□ 0.1
Gli3Q61602 Gm6238-201ENSMUST00000120999 465 ntBASIC15.67■□□□□ 0.1
Gli3Q61602 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15.67■□□□□ 0.1
Gli3Q61602 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Gm9630-201ENSMUST00000178304 885 ntBASIC15.67■□□□□ 0.1
Gli3Q61602 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Gli3Q61602 Gm6946-201ENSMUST00000182237 987 ntBASIC15.67■□□□□ 0.1
Gli3Q61602 Gm21631-201ENSMUST00000195041 754 ntBASIC15.67■□□□□ 0.1
Gli3Q61602 Gm42732-201ENSMUST00000202887 1197 ntBASIC15.67■□□□□ 0.1
Gli3Q61602 Gm44420-201ENSMUST00000203669 490 ntBASIC15.67■□□□□ 0.1
Gli3Q61602 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Gli3Q61602 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 AC154433.1-201ENSMUST00000224401 1183 ntBASIC15.67■□□□□ 0.1
Gli3Q61602 AC102523.1-201ENSMUST00000228706 1144 ntBASIC15.67■□□□□ 0.1
Gli3Q61602 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
Gli3Q61602 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC15.67■□□□□ 0.1
Gli3Q61602 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Gli3Q61602 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Gli3Q61602 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.67■□□□□ 0.1
Gli3Q61602 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli3Q61602 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC15.67■□□□□ 0.1
Gli3Q61602 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Gli3Q61602 Gm5071-201ENSMUST00000104922 1035 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 Gm12028-201ENSMUST00000118065 436 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 Gm25288-201ENSMUST00000122800 265 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 Gm44908-201ENSMUST00000208610 266 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 Gm18124-201ENSMUST00000210695 706 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC15.66■□□□□ 0.1
Gli3Q61602 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms