Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm25766-201ENSMUST00000104101 131 ntBASIC11.7□□□□□ -0.54
Sim2Q61079 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.7□□□□□ -0.54
Sim2Q61079 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Sim2Q61079 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm45856-201ENSMUST00000212752 416 ntBASIC11.7□□□□□ -0.54
Sim2Q61079 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sim2Q61079 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sim2Q61079 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Sim2Q61079 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sim2Q61079 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sim2Q61079 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sim2Q61079 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sim2Q61079 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sim2Q61079 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sim2Q61079 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sim2Q61079 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sim2Q61079 Gm14807-201ENSMUST00000116640 983 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Gm5419-201ENSMUST00000119301 527 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.69□□□□□ -0.54
Sim2Q61079 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.69□□□□□ -0.54
Sim2Q61079 Gm8451-201ENSMUST00000170338 447 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Gm4310-201ENSMUST00000177847 889 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Gm26134-201ENSMUST00000178484 110 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.69□□□□□ -0.54
Sim2Q61079 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sim2Q61079 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.69□□□□□ -0.54
Sim2Q61079 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Gm7536-201ENSMUST00000077389 444 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Gm5453-201ENSMUST00000080866 447 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Sim2Q61079 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.69□□□□□ -0.54
Sim2Q61079 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sim2Q61079 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.68□□□□□ -0.54
Sim2Q61079 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Sim2Q61079 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sim2Q61079 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sim2Q61079 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Gm24791-201ENSMUST00000104284 131 ntBASIC11.68□□□□□ -0.54
Sim2Q61079 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.68□□□□□ -0.54
Sim2Q61079 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.68□□□□□ -0.54
Sim2Q61079 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.68□□□□□ -0.54
Sim2Q61079 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Gm3150-201ENSMUST00000166418 204 ntBASIC11.68□□□□□ -0.54
Sim2Q61079 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sim2Q61079 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sim2Q61079 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms