Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tnfaip3Q60769 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tnfaip3Q60769 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm23200-201ENSMUST00000104379 132 ntBASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm8343-201ENSMUST00000182705 994 ntBASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tnfaip3Q60769 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Gm5419-201ENSMUST00000119301 527 ntBASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Gm15610-201ENSMUST00000120584 195 ntBASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Gm25732-201ENSMUST00000175168 60 ntBASIC11.28□□□□□ -0.6
Tnfaip3Q60769 AU022133-201ENSMUST00000200601 873 ntBASIC11.28□□□□□ -0.6
Tnfaip3Q60769 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Gm26448-201ENSMUST00000082446 203 ntBASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms