Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim41Q5NCC3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim41Q5NCC3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim41Q5NCC3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Gm24791-201ENSMUST00000104284 131 ntBASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Gm15566-201ENSMUST00000121130 590 ntBASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Gm45594-201ENSMUST00000211717 241 ntBASIC20.81■□□□□ 0.92
Trim41Q5NCC3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Gm4930-201ENSMUST00000219926 1087 ntBASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim41Q5NCC3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Gm13916-201ENSMUST00000117368 628 ntBASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Gm12579-201ENSMUST00000118040 783 ntBASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Gm15352-201ENSMUST00000118696 270 ntBASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Gm5537-201ENSMUST00000091117 1252 ntBASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim41Q5NCC3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Gm37437-201ENSMUST00000194451 1937 ntBASIC20.79■□□□□ 0.92
Trim41Q5NCC3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Gm8731-201ENSMUST00000118088 412 ntBASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Gng5-ps-201ENSMUST00000120931 205 ntBASIC20.79■□□□□ 0.92
Trim41Q5NCC3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Gm8451-201ENSMUST00000170338 447 ntBASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 AC154361.2-201ENSMUST00000224747 943 ntBASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Gm7536-201ENSMUST00000077389 444 ntBASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Gm5453-201ENSMUST00000080866 447 ntBASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim41Q5NCC3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms