Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm45865-201ENSMUST00000211815 945 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.82□□□□□ -0.52
Scn2bQ56A07 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn2bQ56A07 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.81□□□□□ -0.52
Scn2bQ56A07 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Scn2bQ56A07 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.81□□□□□ -0.52
Scn2bQ56A07 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.81□□□□□ -0.52
Scn2bQ56A07 Cts7-204ENSMUST00000225321 1257 ntBASIC11.81□□□□□ -0.52
Scn2bQ56A07 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn2bQ56A07 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm14832-201ENSMUST00000121289 322 ntBASIC11.8□□□□□ -0.52
Scn2bQ56A07 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm14381-201ENSMUST00000122105 414 ntBASIC11.8□□□□□ -0.52
Scn2bQ56A07 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Mir6420-201ENSMUST00000185032 102 ntBASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm38341-201ENSMUST00000195357 515 ntBASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.8□□□□□ -0.52
Scn2bQ56A07 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.8□□□□□ -0.52
Scn2bQ56A07 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Scn2bQ56A07 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms