Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gm14028-201ENSMUST00000117434 479 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gm27552-201ENSMUST00000183351 62 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gm27844-201ENSMUST00000183613 62 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Mir7677-201ENSMUST00000184226 67 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gm28686-201ENSMUST00000187404 609 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Gm807-202ENSMUST00000224929 408 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Mir433-201ENSMUST00000093564 124 ntBASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nhlrc4Q3UP44 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nhlrc4Q3UP44 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Gm23200-201ENSMUST00000104379 132 ntBASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Gm14277-201ENSMUST00000121195 360 ntBASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nhlrc4Q3UP44 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms