Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Gm14441-201ENSMUST00000121960 540 ntBASIC12.91□□□□□ -0.34
Snx27Q3UHD6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Gm7940-201ENSMUST00000218195 769 ntBASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snx27Q3UHD6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm15352-201ENSMUST00000118696 270 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm11956-201ENSMUST00000119525 512 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm4726-201ENSMUST00000135604 736 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm6019-201ENSMUST00000148369 736 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm6114-201ENSMUST00000182472 968 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm28937-201ENSMUST00000185413 695 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm29400-201ENSMUST00000187208 695 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm28662-201ENSMUST00000188446 695 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm28251-201ENSMUST00000188835 695 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm37318-201ENSMUST00000194325 695 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm38017-201ENSMUST00000194768 695 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm37287-201ENSMUST00000195449 695 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm37793-201ENSMUST00000195548 695 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm17831-201ENSMUST00000205579 900 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm8285-201ENSMUST00000208293 759 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Snx27Q3UHD6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Snx27Q3UHD6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Snx27Q3UHD6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Gm22920-201ENSMUST00000102175 109 ntBASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Snx27Q3UHD6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms