Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm27440-201ENSMUST00000184785 107 ntBASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Gm5851-201ENSMUST00000194132 1204 ntBASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Gm18711-201ENSMUST00000199341 750 ntBASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Spg11Q3UHA3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Mir1249-201ENSMUST00000116791 98 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gm13422-201ENSMUST00000118834 504 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gm14113-201ENSMUST00000121399 976 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gm27444-201ENSMUST00000184157 137 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gm17221-201ENSMUST00000163909 481 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gm17073-201ENSMUST00000168069 556 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gm29651-201ENSMUST00000189088 697 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 CT025618.1-201ENSMUST00000227409 1279 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.95□□□□□ -0.66
Spg11Q3UHA3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm27149-201ENSMUST00000184716 1266 ntBASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.94□□□□□ -0.66
Spg11Q3UHA3 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 AC125409.3-201ENSMUST00000223488 653 ntBASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm12961-201ENSMUST00000120507 1050 ntBASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm5205-201ENSMUST00000182253 1003 ntBASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC10.94□□□□□ -0.66
Spg11Q3UHA3 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms