Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm14999-201ENSMUST00000121039 624 ntBASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm37008-201ENSMUST00000195712 319 ntBASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.67□□□□□ -0.38
Trim43aQ3TL54 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim43aQ3TL54 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Gm5706-201ENSMUST00000181525 993 ntBASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Gm27023-201ENSMUST00000182372 285 ntBASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Gm27572-201ENSMUST00000183702 255 ntBASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Gm7399-201ENSMUST00000032395 858 ntBASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim43aQ3TL54 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gm13570-201ENSMUST00000140763 309 ntBASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gm7809-201ENSMUST00000153199 742 ntBASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Rprl1-201ENSMUST00000158050 327 ntBASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gm3890-201ENSMUST00000182416 207 ntBASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gm17931-201ENSMUST00000208132 634 ntBASIC12.65□□□□□ -0.38
Trim43aQ3TL54 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms