Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Gm6458-201ENSMUST00000211573 635 ntBASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Gm6180-201ENSMUST00000065243 498 ntBASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccbe1Q3MI99 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm24231-201ENSMUST00000104315 133 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm4875-201ENSMUST00000118257 786 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm12091-201ENSMUST00000146791 830 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm46209-201ENSMUST00000217912 553 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm25857-201ENSMUST00000082788 129 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm26315-201ENSMUST00000083890 321 ntBASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.84□□□□□ -0.67
Ccbe1Q3MI99 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ccbe1Q3MI99 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Ccbe1Q3MI99 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms