Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm7541-201ENSMUST00000118361 535 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm15036-201ENSMUST00000118880 400 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm18776-201ENSMUST00000188833 654 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm43380-201ENSMUST00000200421 220 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm17825-201ENSMUST00000206836 794 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm39288-201ENSMUST00000210554 446 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna5Q2MKA5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Gm19587-201ENSMUST00000191395 545 ntBASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Gm42779-201ENSMUST00000198807 406 ntBASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Gm10263-201ENSMUST00000085163 300 ntBASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna5Q2MKA5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Gm14270-201ENSMUST00000118388 846 ntBASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Gm14213-201ENSMUST00000119778 768 ntBASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Gm43163-201ENSMUST00000196571 442 ntBASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chrna5Q2MKA5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms