Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm15573-201ENSMUST00000119487 540 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm19459-201ENSMUST00000176240 835 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm21092-201ENSMUST00000178995 955 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm43852-201ENSMUST00000202098 917 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.48□□□□□ -0.57
Hoxc4Q08624 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc4Q08624 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.47□□□□□ -0.57
Hoxc4Q08624 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.47□□□□□ -0.57
Hoxc4Q08624 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Gm9132-201ENSMUST00000210182 832 ntBASIC11.47□□□□□ -0.57
Hoxc4Q08624 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.47□□□□□ -0.57
Hoxc4Q08624 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Hoxc4Q08624 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc4Q08624 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc4Q08624 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc4Q08624 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms