Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sox4Q06831 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.77□□□□□ -0.53
Sox4Q06831 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox4Q06831 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox4Q06831 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Matn2-203ENSMUST00000226766 3252 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Gm23596-201ENSMUST00000104304 132 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Gm4909-201ENSMUST00000118749 794 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Gm12036-201ENSMUST00000120008 530 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox4Q06831 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sox4Q06831 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox4Q06831 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Gm8343-201ENSMUST00000182705 994 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Gm27530-201ENSMUST00000184096 98 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Gm9136-201ENSMUST00000193368 454 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Gm19208-201ENSMUST00000213861 912 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Gm9797-202ENSMUST00000218003 294 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sox4Q06831 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox4Q06831 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox4Q06831 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.76□□□□□ -0.53
Sox4Q06831 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox4Q06831 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox4Q06831 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.75□□□□□ -0.53
Sox4Q06831 Gm15004-201ENSMUST00000119192 630 ntBASIC11.75□□□□□ -0.53
Sox4Q06831 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.75□□□□□ -0.53
Sox4Q06831 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Gm25732-201ENSMUST00000175168 60 ntBASIC11.75□□□□□ -0.53
Sox4Q06831 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Gm28686-201ENSMUST00000187404 609 ntBASIC11.75□□□□□ -0.53
Sox4Q06831 Gm3332-201ENSMUST00000189337 928 ntBASIC11.75□□□□□ -0.53
Sox4Q06831 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.75□□□□□ -0.53
Sox4Q06831 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.75□□□□□ -0.53
Sox4Q06831 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox4Q06831 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sox4Q06831 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox4Q06831 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.75□□□□□ -0.53
Sox4Q06831 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms