Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.23□□□□□ -0.29
Col6a1Q04857 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm13916-201ENSMUST00000117368 628 ntBASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.23□□□□□ -0.29
Col6a1Q04857 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm13263-201ENSMUST00000121271 838 ntBASIC13.23□□□□□ -0.29
Col6a1Q04857 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm44958-201ENSMUST00000203734 736 ntBASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a1Q04857 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a1Q04857 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col6a1Q04857 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Gm12990-201ENSMUST00000120372 468 ntBASIC13.22□□□□□ -0.29
Col6a1Q04857 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.22□□□□□ -0.29
Col6a1Q04857 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Gm23119-201ENSMUST00000158610 140 ntBASIC13.22□□□□□ -0.29
Col6a1Q04857 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.22□□□□□ -0.29
Col6a1Q04857 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.22□□□□□ -0.29
Col6a1Q04857 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a1Q04857 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a1Q04857 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a1Q04857 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a1Q04857 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a1Q04857 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a1Q04857 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Col6a1Q04857 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a1Q04857 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a1Q04857 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a1Q04857 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col6a1Q04857 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a1Q04857 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a1Q04857 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a1Q04857 Gm26013-201ENSMUST00000104404 119 ntBASIC13.21□□□□□ -0.29
Col6a1Q04857 Gm11663-201ENSMUST00000117888 290 ntBASIC13.21□□□□□ -0.29
Col6a1Q04857 Gm11511-201ENSMUST00000118146 540 ntBASIC13.21□□□□□ -0.29
Col6a1Q04857 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms