Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcpQ01853 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.8□□□□□ -0.36
VcpQ01853 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VcpQ01853 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VcpQ01853 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VcpQ01853 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.79□□□□□ -0.36
VcpQ01853 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.79□□□□□ -0.36
VcpQ01853 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.79□□□□□ -0.36
VcpQ01853 Gm43916-201ENSMUST00000205062 967 ntBASIC12.79□□□□□ -0.36
VcpQ01853 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.79□□□□□ -0.36
VcpQ01853 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VcpQ01853 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VcpQ01853 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
VcpQ01853 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.78□□□□□ -0.36
VcpQ01853 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VcpQ01853 Gm25880-201ENSMUST00000104331 132 ntBASIC12.78□□□□□ -0.36
VcpQ01853 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VcpQ01853 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
VcpQ01853 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.78□□□□□ -0.36
VcpQ01853 Gm12380-201ENSMUST00000119012 544 ntBASIC12.78□□□□□ -0.36
VcpQ01853 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.78□□□□□ -0.36
VcpQ01853 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.78□□□□□ -0.36
VcpQ01853 Gm23119-201ENSMUST00000158610 140 ntBASIC12.78□□□□□ -0.36
VcpQ01853 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VcpQ01853 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.78□□□□□ -0.36
VcpQ01853 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.78□□□□□ -0.36
VcpQ01853 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
VcpQ01853 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.78□□□□□ -0.36
VcpQ01853 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VcpQ01853 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VcpQ01853 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
VcpQ01853 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VcpQ01853 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VcpQ01853 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
VcpQ01853 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.77□□□□□ -0.36
VcpQ01853 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
VcpQ01853 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
VcpQ01853 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.77□□□□□ -0.36
VcpQ01853 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VcpQ01853 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
VcpQ01853 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
VcpQ01853 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
VcpQ01853 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VcpQ01853 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms