Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
GabpaQ00422 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
GabpaQ00422 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GabpaQ00422 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GabpaQ00422 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GabpaQ00422 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.55□□□□□ -0.24
GabpaQ00422 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.55□□□□□ -0.24
GabpaQ00422 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GabpaQ00422 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GabpaQ00422 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GabpaQ00422 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GabpaQ00422 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
GabpaQ00422 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
GabpaQ00422 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
GabpaQ00422 Gm10731-201ENSMUST00000181171 448 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.54□□□□□ -0.24
GabpaQ00422 Gm37299-201ENSMUST00000193951 826 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 Gm43186-201ENSMUST00000198130 824 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.54□□□□□ -0.24
GabpaQ00422 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.54□□□□□ -0.24
GabpaQ00422 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.54□□□□□ -0.24
GabpaQ00422 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
GabpaQ00422 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
GabpaQ00422 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GabpaQ00422 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.53□□□□□ -0.24
GabpaQ00422 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GabpaQ00422 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Gm12036-201ENSMUST00000120008 530 ntBASIC13.53□□□□□ -0.24
GabpaQ00422 Gm11836-201ENSMUST00000121022 441 ntBASIC13.53□□□□□ -0.24
GabpaQ00422 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.53□□□□□ -0.24
GabpaQ00422 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.53□□□□□ -0.24
GabpaQ00422 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.53□□□□□ -0.24
GabpaQ00422 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.53□□□□□ -0.24
GabpaQ00422 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.53□□□□□ -0.24
GabpaQ00422 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.53□□□□□ -0.24
GabpaQ00422 Gm21092-201ENSMUST00000178995 955 ntBASIC13.53□□□□□ -0.24
GabpaQ00422 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.53□□□□□ -0.24
GabpaQ00422 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.53□□□□□ -0.24
GabpaQ00422 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.53□□□□□ -0.24
GabpaQ00422 Gm45113-201ENSMUST00000207518 165 ntBASIC13.53□□□□□ -0.24
GabpaQ00422 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.53□□□□□ -0.24
GabpaQ00422 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.53□□□□□ -0.24
GabpaQ00422 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
GabpaQ00422 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GabpaQ00422 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.53□□□□□ -0.24
GabpaQ00422 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.53□□□□□ -0.24
GabpaQ00422 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GabpaQ00422 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GabpaQ00422 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GabpaQ00422 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms