Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-3P97334 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-3P97334 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.94□□□□□ -0.02
Nkx2-3P97334 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm25063-201ENSMUST00000104666 94 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm12030-201ENSMUST00000121917 223 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm9089-201ENSMUST00000122027 526 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm11960-201ENSMUST00000122068 925 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-3P97334 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm6114-201ENSMUST00000182472 968 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm27390-201ENSMUST00000184516 176 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 Gm39288-201ENSMUST00000210554 446 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-3P97334 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-3P97334 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.93□□□□□ -0.02
Nkx2-3P97334 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-3P97334 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.92□□□□□ -0.02
Nkx2-3P97334 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Gm14395-201ENSMUST00000120494 563 ntBASIC14.92□□□□□ -0.02
Nkx2-3P97334 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.92□□□□□ -0.02
Nkx2-3P97334 Gm38314-201ENSMUST00000195709 625 ntBASIC14.92□□□□□ -0.02
Nkx2-3P97334 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Gm23680-201ENSMUST00000083162 164 ntBASIC14.92□□□□□ -0.02
Nkx2-3P97334 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-3P97334 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm12106-201ENSMUST00000116006 1200 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms