Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trim43cP86449 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim43cP86449 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim43cP86449 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim43cP86449 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim43cP86449 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim43cP86449 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim43cP86449 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.98□□□□□ -0.33
Trim43cP86449 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim43cP86449 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.98□□□□□ -0.33
Trim43cP86449 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim43cP86449 Gm45433-201ENSMUST00000209386 247 ntBASIC12.98□□□□□ -0.33
Trim43cP86449 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim43cP86449 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim43cP86449 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trim43cP86449 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.98□□□□□ -0.33
Trim43cP86449 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim43cP86449 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim43cP86449 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trim43cP86449 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.97□□□□□ -0.33
Trim43cP86449 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim43cP86449 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Gm4310-201ENSMUST00000177847 889 ntBASIC12.97□□□□□ -0.33
Trim43cP86449 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Gm6114-201ENSMUST00000182472 968 ntBASIC12.97□□□□□ -0.33
Trim43cP86449 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim43cP86449 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.97□□□□□ -0.33
Trim43cP86449 Gm270-201ENSMUST00000223010 976 ntBASIC12.97□□□□□ -0.33
Trim43cP86449 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim43cP86449 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.97□□□□□ -0.33
Trim43cP86449 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim43cP86449 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim43cP86449 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim43cP86449 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.96□□□□□ -0.33
Trim43cP86449 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.96□□□□□ -0.33
Trim43cP86449 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim43cP86449 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.96□□□□□ -0.33
Trim43cP86449 Gm14130-201ENSMUST00000118417 987 ntBASIC12.96□□□□□ -0.33
Trim43cP86449 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim43cP86449 Gm14208-201ENSMUST00000119645 678 ntBASIC12.96□□□□□ -0.33
Trim43cP86449 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim43cP86449 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms