Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.32□□□□□ -0.44
Trim43bP86448 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43bP86448 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim43bP86448 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim43bP86448 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.32□□□□□ -0.44
Trim43bP86448 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.31□□□□□ -0.44
Trim43bP86448 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim43bP86448 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim43bP86448 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim43bP86448 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Trim43bP86448 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim43bP86448 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim43bP86448 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.31□□□□□ -0.44
Trim43bP86448 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Gm6334-201ENSMUST00000207083 228 ntBASIC12.31□□□□□ -0.44
Trim43bP86448 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim43bP86448 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.31□□□□□ -0.44
Trim43bP86448 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim43bP86448 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim43bP86448 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim43bP86448 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim43bP86448 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim43bP86448 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim43bP86448 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trim43bP86448 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.3□□□□□ -0.44
Trim43bP86448 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim43bP86448 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Gm26083-201ENSMUST00000157904 193 ntBASIC12.3□□□□□ -0.44
Trim43bP86448 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim43bP86448 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Gm37259-201ENSMUST00000193903 849 ntBASIC12.3□□□□□ -0.44
Trim43bP86448 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim43bP86448 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.3□□□□□ -0.44
Trim43bP86448 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.3□□□□□ -0.44
Trim43bP86448 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim43bP86448 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim43bP86448 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trim43bP86448 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim43bP86448 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
Trim43bP86448 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.3□□□□□ -0.44
Trim43bP86448 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trim43bP86448 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.3□□□□□ -0.44
Trim43bP86448 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim43bP86448 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.3□□□□□ -0.44
Trim43bP86448 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim43bP86448 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms