Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Mir6546-201ENSMUST00000184460 62 ntBASIC12.93□□□□□ -0.34
CiitaP79621 Gm9540-201ENSMUST00000188230 478 ntBASIC12.93□□□□□ -0.34
CiitaP79621 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.93□□□□□ -0.34
CiitaP79621 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.93□□□□□ -0.34
CiitaP79621 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
CiitaP79621 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CiitaP79621 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CiitaP79621 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.93□□□□□ -0.34
CiitaP79621 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CiitaP79621 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.92□□□□□ -0.34
CiitaP79621 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Gm14263-201ENSMUST00000117955 746 ntBASIC12.92□□□□□ -0.34
CiitaP79621 Gm15432-201ENSMUST00000121106 195 ntBASIC12.92□□□□□ -0.34
CiitaP79621 Gm12176-201ENSMUST00000121420 875 ntBASIC12.92□□□□□ -0.34
CiitaP79621 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.92□□□□□ -0.34
CiitaP79621 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.92□□□□□ -0.34
CiitaP79621 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.92□□□□□ -0.34
CiitaP79621 Gm10051-201ENSMUST00000145209 414 ntBASIC12.92□□□□□ -0.34
CiitaP79621 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.92□□□□□ -0.34
CiitaP79621 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Gm6114-201ENSMUST00000182472 968 ntBASIC12.92□□□□□ -0.34
CiitaP79621 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.92□□□□□ -0.34
CiitaP79621 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.92□□□□□ -0.34
CiitaP79621 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CiitaP79621 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CiitaP79621 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CiitaP79621 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CiitaP79621 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CiitaP79621 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CiitaP79621 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Gm22711-201ENSMUST00000116890 133 ntBASIC12.91□□□□□ -0.34
CiitaP79621 Gm13916-201ENSMUST00000117368 628 ntBASIC12.91□□□□□ -0.34
CiitaP79621 Gm8731-201ENSMUST00000118088 412 ntBASIC12.91□□□□□ -0.34
CiitaP79621 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.91□□□□□ -0.34
CiitaP79621 Gm22334-201ENSMUST00000158070 133 ntBASIC12.91□□□□□ -0.34
CiitaP79621 Mir1943-201ENSMUST00000158276 73 ntBASIC12.91□□□□□ -0.34
CiitaP79621 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CiitaP79621 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.91□□□□□ -0.34
CiitaP79621 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CiitaP79621 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CiitaP79621 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms