Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC19.2■□□□□ 0.66
Cux2P70298 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cux2P70298 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Gm14740-201ENSMUST00000118538 1150 ntBASIC19.19■□□□□ 0.66
Cux2P70298 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC19.19■□□□□ 0.66
Cux2P70298 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Gm27440-201ENSMUST00000184785 107 ntBASIC19.19■□□□□ 0.66
Cux2P70298 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Gm5308-201ENSMUST00000196752 1354 ntBASIC19.19■□□□□ 0.66
Cux2P70298 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.19■□□□□ 0.66
Cux2P70298 Gm37014-201ENSMUST00000194723 2253 ntBASIC19.19■□□□□ 0.66
Cux2P70298 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cux2P70298 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Cux2P70298 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC19.18■□□□□ 0.66
Cux2P70298 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC19.18■□□□□ 0.66
Cux2P70298 Gm9133-201ENSMUST00000118289 540 ntBASIC19.18■□□□□ 0.66
Cux2P70298 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC19.18■□□□□ 0.66
Cux2P70298 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC19.18■□□□□ 0.66
Cux2P70298 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC19.18■□□□□ 0.66
Cux2P70298 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC19.18■□□□□ 0.66
Cux2P70298 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.18■□□□□ 0.66
Cux2P70298 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC19.18■□□□□ 0.66
Cux2P70298 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC19.18■□□□□ 0.66
Cux2P70298 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cux2P70298 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cux2P70298 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC19.17■□□□□ 0.66
Cux2P70298 Gm8302-201ENSMUST00000119217 852 ntBASIC19.17■□□□□ 0.66
Cux2P70298 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC19.17■□□□□ 0.66
Cux2P70298 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC19.17■□□□□ 0.66
Cux2P70298 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC19.17■□□□□ 0.66
Cux2P70298 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC19.17■□□□□ 0.66
Cux2P70298 AC134601.2-201ENSMUST00000221071 130 ntBASIC19.17■□□□□ 0.66
Cux2P70298 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cux2P70298 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cux2P70298 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cux2P70298 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cux2P70298 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC19.17■□□□□ 0.66
Cux2P70298 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cux2P70298 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cux2P70298 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cux2P70298 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cux2P70298 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cux2P70298 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Gm8522-201ENSMUST00000118416 1929 ntBASIC19.17■□□□□ 0.66
Cux2P70298 Gm15815-201ENSMUST00000120569 255 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms