Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Rpl39P62892 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Rpl39P62892 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Rpl39P62892 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Rpl39P62892 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Rpl39P62892 BC043934-202ENSMUST00000185694 2356 ntBASIC8.48□□□□□ -1.05
Rpl39P62892 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC8.48□□□□□ -1.05
Rpl39P62892 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC8.48□□□□□ -1.05
Rpl39P62892 Gm12314-201ENSMUST00000118104 538 ntBASIC8.48□□□□□ -1.05
Rpl39P62892 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC8.48□□□□□ -1.05
Rpl39P62892 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC8.48□□□□□ -1.05
Rpl39P62892 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC8.48□□□□□ -1.05
Rpl39P62892 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Rpl39P62892 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC8.48□□□□□ -1.05
Rpl39P62892 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC8.48□□□□□ -1.05
Rpl39P62892 AC125206.2-201ENSMUST00000217454 574 ntBASIC8.48□□□□□ -1.05
Rpl39P62892 AC153929.1-201ENSMUST00000219009 303 ntBASIC8.48□□□□□ -1.05
Rpl39P62892 Gm2423-201ENSMUST00000074863 733 ntBASIC8.48□□□□□ -1.05
Rpl39P62892 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Rpl39P62892 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Rpl39P62892 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
Rpl39P62892 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Rpl39P62892 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Rpl39P62892 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Rpl39P62892 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 Gm3836-201ENSMUST00000211377 1613 ntBASIC8.47□□□□□ -1.05
Rpl39P62892 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC8.47□□□□□ -1.05
Rpl39P62892 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Rpl39P62892 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
Rpl39P62892 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Rpl39P62892 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
Rpl39P62892 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC8.47□□□□□ -1.05
Rpl39P62892 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Rpl39P62892 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Rpl39P62892 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Rpl39P62892 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC8.47□□□□□ -1.05
Rpl39P62892 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Gm21136-201ENSMUST00000186812 2575 ntBASIC8.47□□□□□ -1.05
Rpl39P62892 Gm6605-201ENSMUST00000031488 2574 ntBASIC8.47□□□□□ -1.05
Rpl39P62892 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Rpl39P62892 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Rpl39P62892 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms