Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 A430078G23Rik-201ENSMUST00000098966 2945 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Rps28P62858 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Rps28P62858 Nuggc-202ENSMUST00000150897 2745 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Rps28P62858 Gm8049-201ENSMUST00000214336 1782 ntBASIC6.82□□□□□ -1.32
Rps28P62858 Gm28321-201ENSMUST00000187677 2327 ntBASIC6.82□□□□□ -1.32
Rps28P62858 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rps28P62858 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rps28P62858 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rps28P62858 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rps28P62858 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rps28P62858 Slc2a9-202ENSMUST00000067872 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rps28P62858 Gm43119-201ENSMUST00000196957 2122 ntBASIC6.82□□□□□ -1.32
Rps28P62858 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Rps28P62858 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rps28P62858 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Rps28P62858 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Rps28P62858 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC6.81□□□□□ -1.32
Rps28P62858 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC6.81□□□□□ -1.32
Rps28P62858 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 2810407A14Rik-202ENSMUST00000189929 2172 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Rps28P62858 Gm8706-201ENSMUST00000197372 1491 ntBASIC6.81□□□□□ -1.32
Rps28P62858 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC6.81□□□□□ -1.32
Rps28P62858 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Rps28P62858 CT025639.2-202ENSMUST00000225298 1630 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Rps28P62858 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Gm7696-201ENSMUST00000174727 907 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Gm43137-201ENSMUST00000198052 594 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC6.81□□□□□ -1.32
Rps28P62858 Gm18101-201ENSMUST00000215769 548 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Gm40848-201ENSMUST00000221998 324 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Gm3695-201ENSMUST00000087222 1009 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC6.81□□□□□ -1.32
Rps28P62858 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Gm37500-201ENSMUST00000192059 1443 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Gm43318-201ENSMUST00000199939 1949 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 AC125351.1-201ENSMUST00000221438 2223 ntBASIC6.81□□□□□ -1.32
Rps28P62858 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Eif2ak4-205ENSMUST00000110872 4907 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rps28P62858 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC6.81□□□□□ -1.32
Rps28P62858 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Rps28P62858 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 St7-201ENSMUST00000000674 1818 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Gm44437-201ENSMUST00000203832 4038 ntBASIC6.8□□□□□ -1.32
Rps28P62858 AC155270.1-201ENSMUST00000221626 4028 ntBASIC6.8□□□□□ -1.32
Rps28P62858 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Ncaph2-203ENSMUST00000088717 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Apol11b-201ENSMUST00000166623 2057 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Rps28P62858 Gm37671-201ENSMUST00000193198 2096 ntBASIC6.8□□□□□ -1.32
Rps28P62858 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC6.8□□□□□ -1.32
Rps28P62858 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC6.8□□□□□ -1.32
Rps28P62858 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rps28P62858 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC6.8□□□□□ -1.32
Rps28P62858 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms