Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Gm42937-201ENSMUST00000197360 752 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 Gm44405-201ENSMUST00000198952 126 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 Gm5781-201ENSMUST00000219792 443 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 Gm10268-201ENSMUST00000085340 555 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.62□□□□□ -0.71
Sf3b6P59708 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.62□□□□□ -0.71
Sf3b6P59708 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sf3b6P59708 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm12106-201ENSMUST00000116006 1200 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm14247-201ENSMUST00000120950 237 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm13342-201ENSMUST00000121055 207 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm1335-201ENSMUST00000121653 386 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.61□□□□□ -0.71
Sf3b6P59708 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm5706-201ENSMUST00000181525 993 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Mir7085-201ENSMUST00000184353 66 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm10076-201ENSMUST00000073238 384 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sf3b6P59708 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sf3b6P59708 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.61□□□□□ -0.71
Sf3b6P59708 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms