Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm7003-201ENSMUST00000195089 312 ntBASIC11.29□□□□□ -0.6
Nup43P59235 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Nup43P59235 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.29□□□□□ -0.6
Nup43P59235 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.29□□□□□ -0.6
Nup43P59235 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Nup43P59235 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Nup43P59235 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.29□□□□□ -0.6
Nup43P59235 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nup43P59235 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nup43P59235 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.28□□□□□ -0.6
Nup43P59235 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nup43P59235 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nup43P59235 Gm23949-201ENSMUST00000104027 127 ntBASIC11.28□□□□□ -0.6
Nup43P59235 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.28□□□□□ -0.6
Nup43P59235 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.28□□□□□ -0.6
Nup43P59235 Gm15711-201ENSMUST00000118889 535 ntBASIC11.28□□□□□ -0.6
Nup43P59235 Gm14208-201ENSMUST00000119645 678 ntBASIC11.28□□□□□ -0.6
Nup43P59235 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.28□□□□□ -0.6
Nup43P59235 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Nup43P59235 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.28□□□□□ -0.6
Nup43P59235 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.28□□□□□ -0.6
Nup43P59235 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.28□□□□□ -0.6
Nup43P59235 Gm4157-201ENSMUST00000211647 679 ntBASIC11.28□□□□□ -0.6
Nup43P59235 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.28□□□□□ -0.6
Nup43P59235 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.28□□□□□ -0.6
Nup43P59235 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nup43P59235 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nup43P59235 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nup43P59235 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nup43P59235 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.28□□□□□ -0.6
Nup43P59235 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.28□□□□□ -0.6
Nup43P59235 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.28□□□□□ -0.6
Nup43P59235 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nup43P59235 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Nup43P59235 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nup43P59235 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nup43P59235 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.27□□□□□ -0.6
Nup43P59235 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nup43P59235 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nup43P59235 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nup43P59235 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nup43P59235 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Nup43P59235 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Nup43P59235 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nup43P59235 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.27□□□□□ -0.61
Nup43P59235 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nup43P59235 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
Nup43P59235 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nup43P59235 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nup43P59235 Gm15236-201ENSMUST00000117309 379 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm12380-201ENSMUST00000119012 544 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm11660-201ENSMUST00000120955 412 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm14277-201ENSMUST00000121195 360 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.27□□□□□ -0.61
Nup43P59235 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.27□□□□□ -0.61
Nup43P59235 Mir7677-201ENSMUST00000184226 67 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm36991-201ENSMUST00000191800 648 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm9136-201ENSMUST00000193368 454 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms