Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SmoP56726 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12□□□□□ -0.49
SmoP56726 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12□□□□□ -0.49
SmoP56726 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SmoP56726 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SmoP56726 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SmoP56726 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
SmoP56726 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.99□□□□□ -0.49
SmoP56726 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.99□□□□□ -0.49
SmoP56726 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
SmoP56726 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.99□□□□□ -0.49
SmoP56726 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.99□□□□□ -0.49
SmoP56726 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.99□□□□□ -0.49
SmoP56726 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.99□□□□□ -0.49
SmoP56726 Gm8815-201ENSMUST00000173809 620 ntBASIC11.99□□□□□ -0.49
SmoP56726 Gm6450-201ENSMUST00000200896 574 ntBASIC11.99□□□□□ -0.49
SmoP56726 Gm44100-201ENSMUST00000204329 436 ntBASIC11.99□□□□□ -0.49
SmoP56726 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.99□□□□□ -0.49
SmoP56726 Gm6867-201ENSMUST00000219165 425 ntBASIC11.99□□□□□ -0.49
SmoP56726 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Ntng1-201ENSMUST00000051253 327 ntBASIC11.99□□□□□ -0.49
SmoP56726 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.99□□□□□ -0.49
SmoP56726 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SmoP56726 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.99□□□□□ -0.49
SmoP56726 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.99□□□□□ -0.49
SmoP56726 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SmoP56726 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.99□□□□□ -0.49
SmoP56726 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.99□□□□□ -0.49
SmoP56726 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
SmoP56726 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SmoP56726 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.98□□□□□ -0.49
SmoP56726 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SmoP56726 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SmoP56726 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
SmoP56726 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
SmoP56726 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.98□□□□□ -0.49
SmoP56726 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SmoP56726 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.98□□□□□ -0.49
SmoP56726 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SmoP56726 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.98□□□□□ -0.49
SmoP56726 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.98□□□□□ -0.49
SmoP56726 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Gm13809-201ENSMUST00000117921 597 ntBASIC11.98□□□□□ -0.49
SmoP56726 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.98□□□□□ -0.49
SmoP56726 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SmoP56726 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SmoP56726 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.98□□□□□ -0.49
SmoP56726 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms