Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.91□□□□□ -0.34
Nub1P54729 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nub1P54729 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.91□□□□□ -0.34
Nub1P54729 Cog3-203ENSMUST00000227473 4197 ntBASIC12.91□□□□□ -0.34
Nub1P54729 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nub1P54729 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Mir877-201ENSMUST00000104738 85 ntBASIC12.91□□□□□ -0.34
Nub1P54729 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.91□□□□□ -0.34
Nub1P54729 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Gm26361-201ENSMUST00000158868 186 ntBASIC12.91□□□□□ -0.34
Nub1P54729 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nub1P54729 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Nub1P54729 Gm5706-201ENSMUST00000181525 993 ntBASIC12.91□□□□□ -0.34
Nub1P54729 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.91□□□□□ -0.34
Nub1P54729 Gm44262-201ENSMUST00000204969 372 ntBASIC12.91□□□□□ -0.34
Nub1P54729 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nub1P54729 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nub1P54729 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.91□□□□□ -0.34
Nub1P54729 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.91□□□□□ -0.34
Nub1P54729 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nub1P54729 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nub1P54729 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.91□□□□□ -0.34
Nub1P54729 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.91□□□□□ -0.34
Nub1P54729 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nub1P54729 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Nub1P54729 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.9□□□□□ -0.34
Nub1P54729 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nub1P54729 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.9□□□□□ -0.34
Nub1P54729 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nub1P54729 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.9□□□□□ -0.34
Nub1P54729 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.9□□□□□ -0.34
Nub1P54729 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.9□□□□□ -0.34
Nub1P54729 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.9□□□□□ -0.34
Nub1P54729 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.9□□□□□ -0.34
Nub1P54729 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.9□□□□□ -0.34
Nub1P54729 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.9□□□□□ -0.34
Nub1P54729 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.9□□□□□ -0.34
Nub1P54729 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nub1P54729 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.9□□□□□ -0.34
Nub1P54729 Gm8913-201ENSMUST00000209491 641 ntBASIC12.9□□□□□ -0.34
Nub1P54729 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.9□□□□□ -0.34
Nub1P54729 Gm9257-201ENSMUST00000221254 232 ntBASIC12.9□□□□□ -0.34
Nub1P54729 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.9□□□□□ -0.34
Nub1P54729 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nub1P54729 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.9□□□□□ -0.34
Nub1P54729 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nub1P54729 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.9□□□□□ -0.35
Nub1P54729 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.9□□□□□ -0.35
Nub1P54729 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nub1P54729 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nub1P54729 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nub1P54729 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 141.5 ms