Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.96□□□□□ -0.49
Fdft1P53798 Gm9996-201ENSMUST00000070359 913 ntBASIC11.96□□□□□ -0.49
Fdft1P53798 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Fdft1P53798 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Fdft1P53798 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.95□□□□□ -0.5
Fdft1P53798 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Fdft1P53798 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.95□□□□□ -0.5
Fdft1P53798 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Fdft1P53798 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.95□□□□□ -0.5
Fdft1P53798 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.95□□□□□ -0.5
Fdft1P53798 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.95□□□□□ -0.5
Fdft1P53798 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Gm2991-201ENSMUST00000173338 480 ntBASIC11.95□□□□□ -0.5
Fdft1P53798 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Gm6621-201ENSMUST00000193251 772 ntBASIC11.95□□□□□ -0.5
Fdft1P53798 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.95□□□□□ -0.5
Fdft1P53798 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.95□□□□□ -0.5
Fdft1P53798 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Fdft1P53798 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.95□□□□□ -0.5
Fdft1P53798 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.95□□□□□ -0.5
Fdft1P53798 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fdft1P53798 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Fdft1P53798 BC043934-202ENSMUST00000185694 2356 ntBASIC11.94□□□□□ -0.5
Fdft1P53798 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.94□□□□□ -0.5
Fdft1P53798 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.94□□□□□ -0.5
Fdft1P53798 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fdft1P53798 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Fdft1P53798 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.94□□□□□ -0.5
Fdft1P53798 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.94□□□□□ -0.5
Fdft1P53798 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.94□□□□□ -0.5
Fdft1P53798 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.94□□□□□ -0.5
Fdft1P53798 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.94□□□□□ -0.5
Fdft1P53798 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.94□□□□□ -0.5
Fdft1P53798 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Fdft1P53798 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fdft1P53798 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Fdft1P53798 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fdft1P53798 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fdft1P53798 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fdft1P53798 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms