Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdx1P52946 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Pdx1P52946 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm15711-201ENSMUST00000118889 535 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 Gm15004-201ENSMUST00000119192 630 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.8□□□□□ -0.52
Pdx1P52946 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm2260-201ENSMUST00000184965 657 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm18056-201ENSMUST00000207670 568 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 Gm18061-201ENSMUST00000208350 562 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 Gm18063-201ENSMUST00000208529 568 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 Gm18052-201ENSMUST00000208750 559 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm8385-201ENSMUST00000058999 643 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pdx1P52946 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Pdx1P52946 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.8□□□□□ -0.52
Pdx1P52946 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdx1P52946 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.79□□□□□ -0.52
Pdx1P52946 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.79□□□□□ -0.52
Pdx1P52946 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pdx1P52946 Gm23949-201ENSMUST00000104027 127 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.79□□□□□ -0.52
Pdx1P52946 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Gm14017-201ENSMUST00000121934 386 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Gm14441-201ENSMUST00000121960 540 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.79□□□□□ -0.52
Pdx1P52946 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.79□□□□□ -0.52
Pdx1P52946 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Pdx1P52946 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.79□□□□□ -0.52
Pdx1P52946 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Pdx1P52946 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pdx1P52946 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.79□□□□□ -0.52
Pdx1P52946 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.79□□□□□ -0.52
Pdx1P52946 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdx1P52946 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms